Search Tips
of 1 Next >
Results Found: 8
  • Cholangiocarcinoma (TCGA, PanCancer Atlas) data

    Description

    This dataset contains summary data visualizations and clinical data from a broad sampling of 36 cholangiocarcinomas from 36 patients. The data was gathered as part of the PanCancer Atlas initiative, which aims to answer big, overarching questions about cancer by examining the full set of tumors characterized in the robust TCGA dataset. The clinical data includes mutation count, information about mutated...

    Subject
    Cholangiocarcinoma
    DNA Mutational Analysis
    Access Rights
    Free to All
  • Cholangiocarcinoma (MSK, Clin Cancer Res 2018): Targeted sequencing (MSK-IMPACT) of 195 tumor samples (194 with matched normals) from 192 cholangiocarcinoma patients.

    Description

    This dataset contains summary data visualizations and clinical data from a broad sampling of 195 cholangiocarcinomas from 192 patients. The data was gathered utilizing the MSK-IMPACT targeted sequencing test. The clinical data includes tumor type (based on the opensource OncoTree ontology developed at MSK), mutation count, information about mutated genes, patient demographics, and disease status....

    Subject
    Cholangiocarcinoma
    DNA Mutational Analysis
    Access Rights
    Free to All
  • SUMMIT - Neratinib Basket Study (Multi-Institute, Nature 2018): MSK-IMPACT sequencing of 86 patients with HER2- and HER3-mutant cancers

    Description

    This dataset contains summary data visualizations and clinical data from a broad sampling of HER2- and HER3-mutant tumors. The data was generated utilizing the MSK-IMPACT targeted sequencing test. The clinical data includes tumor type (based on the opensource OncoTree ontology developed at MSK), mutation count, information about mutated genes, Amplification Status, Best objective response rate, Bubble...

    Subject
    Breast Neoplasms
    Carcinoma, Hepatocellular
    Carcinoma, Non-Small-Cell Lung
    Carcinoma, Renal Cell
    Colorectal Neoplasms
    DNA Mutational Analysis
    Endometrial Neoplasms
    Esophageal Neoplasms
    Genes, erbB
    Genes, erbB-2
    Melanoma
    Ovarian Neoplasms
    Pancreatic Neoplasms
    Salivary Gland Neoplasms
    Sarcoma
    Skin Neoplasms
    Urinary Bladder Neoplasms
    Uterine Cervical Neoplasms
    Access Rights
    Free to All
  • Tumors with TRK fusions (MSK, 2019): Tumors with TRK fusions based on MSK-IMPACT targeted sequencing.

    Description

    This dataset contains summary data visualizations and clinical data from a broad sampling of tropomyosin receptor kinase (TRK) fusion tumors. The data was gathered utilizing the MSK-IMPACT targeted sequencing test. The clinical data includes tumor type (based on the opensource OncoTree ontology developed at MSK), information about mutated genes, patient demographics, and modality. The data set also...

    Subject
    DNA Mutational Analysis
    Oncogene Proteins, Fusion
    Receptor Protein-Tyrosine Kinases
    Receptor, trkA
    Receptor, trkB
    Receptor, trkC
    Access Rights
    Free to All
  • Cholangiocarcinoma (National Cancer Centre of Singapore, Nat Genet 2013): Exome sequencing of 15 cholangiocarcinoma cases.

    Description

    This dataset contains summary data visualizations and clinical data from a sampling of 15 cholangiocarcinomas from 15 patients. gathered for a study by the National Cancer Centre of Singapore. The clinical data includes de-identified patient and tumor sample ID, mutation count, patient demographics, anatomical subtype, and anti_O_viverrini_IgG. The clinical data can be downloaded as a .tsv file.

    Subject
    Cholangiocarcinoma
    DNA Mutational Analysis
    Access Rights
    Free to All
  • Cholangiocarcinoma (TCGA, Firehose Legacy)

    Description

    TCGA Cholangiocarcinoma. Source data from GDAC Firehose. Previously known as TCGA Provisional. This dataset contains summary data visualizations and clinical data from a broad sampling of 51 cholangiocarcinomas from 51 patients. The data was gathered as part of the Broad Institute of MIT and Harvard Firehose initiative, a cancer analysis pipeline. The clinical data includes mutation count, information...

    Subject
    Cholangiocarcinoma
    DNA Mutational Analysis
    Access Rights
    Free to All
  • Intrahepatic Cholangiocarcinoma (MSK, Hepatology 2021): Targeted sequencing of 412 intrahepatic cholangiocarcinoma tumor/normal sample pairs.

    Description

    This dataset contains summary data visualizations and clinical data from a broad sampling of 412 intrahepatic cholangiocarcinomas from 412 patients. The clinical data includes mutation count, information about mutated genes, patient demographics, adjuvant chemotherapy, patient BMI, Duct Type, DZ Extent, CA19, CA19 High, and presence of chronic viral hepatitis, cirrhosis, diabetes, ECOG BIN, HAIC,...

    Subject
    Cholangiocarcinoma
    DNA Mutational Analysis
    Liver Neoplasms
    Access Rights
    Free to All
  • Intrahepatic Cholangiocarcinoma: Targeted sequencing of IMPACT and CMO samples

    Description

    This dataset contains summary data visualizations and clinical data from a sampling of 219 intrahepatic cholangiocarcinomas from 219 patients. The clinical data includes mutation count, presence of an Archer Panel, MSK IMPACT TMB Percentiles across & within tumor types, Metastatic Sites and the availability of MSK Pathology slide, Mutation Count, Age at Which Sequencing was Reported, Archer Panel,...

    Subject
    Adenocarcinoma
    Cholangiocarcinoma
    DNA Mutational Analysis
    Liver Neoplasms
    Access Rights
    Free to All